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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cofactor binding | Interacting selectively and non-covalently with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Pentatricopeptide repeat-containing protein-like protein [Arabidopsis thaliana] gi|334187889|ref|NP_001190376.1| | 7 | ||
| – | Uncharacterized protein TCM_042786 [Theobroma cacao] gi|508726276|gb|EOY18173.1| | 5 | ||
| – | PREDICTED: protein CREG1-like [Glycine max] gi|356564694|ref|XP_003550584.1| | 6 | ||
| – | PREDICTED: protein CREG1-like [Cicer arietinum] gi|502165283|ref|XP_004513507.1| | 12 | ||
| – | PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi|502132996|ref|XP_004501612.1| | 22 | ||
| – | PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Cicer arietinum] gi|502132996|ref|XP_004501612.1| | 28 | ||
| – | Root border cell-specific protein [Pisum sativum] gi|7381225|gb|AAF61443.1|AF139187_1 | 15 | ||
| – | Root border cell-specific protein [Pisum sativum] gi|7381225|gb|AAF61443.1|AF139187_1 | 15 | ||
| – | PREDICTED: protein CREG1 [Vitis vinifera] gi|225452574|ref|XP_002280727.1| | 6 | ||
| – | Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao] gi|508713060|gb|EOY04957.1| | 12 | ||
| – | Proton gradient regulation 7 [Arabidopsis thaliana] gi|18402922|ref|NP_566678.1| | 5 | ||
| – | Pyridoxamine 5'-phosphate oxidase family protein isoform 1 [Theobroma cacao] gi|508779090|gb|EOY26346.1| | 7 | ||
| – | Pyridoxamine 5'-phosphate oxidase family protein isoform 1 [Theobroma cacao] gi|508779090|gb|EOY26346.1| | 6 | ||
| – | PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 2-like isoform X1 [Cicer arietinum] gi|502156801|ref|XP_004510653.1| | 9 | ||
| – | Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Desulfosporosinus orientis DSM 765] gi|374995160|ref|YP_004970659.1| | 6 | ||
| – | Pentatricopeptide repeat (PPR) superfamily protein; TAIR: AT3G59300.3 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140; TrEMBL-Plants: tr|G7KCZ0|G7KCZ0_MEDTR PPR superfamily protein; Found in the gene: LotjaGi1g1v0047600 | 11 | ||
| – | Pyridoxine/pyridoxamine 5'-phosphate oxidase; TAIR: AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase; Swiss-Prot: sp|Q9LTX3|PPOX1_ARATH Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic; TrEMBL-Plants: tr|I1JV54|I1JV54_SOYBN NAD(P)H-hydrate epimerase; Found in the gene: LotjaGi1g1v0349900 | 29 | ||
| – | Pentatricopeptide repeat (PPR) superfamily protein; TAIR: AT3G04020.1 hypothetical protein; Swiss-Prot: sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140; TrEMBL-Plants: tr|A0A151S7I2|A0A151S7I2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0538800 | 6 | ||
| – | FMN binding; TAIR: AT3G03890.1 FMN binding protein; Swiss-Prot: sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic; TrEMBL-Plants: tr|Q9M7D2|Q9M7D2_PEA Root border cell-specific protein; Found in the gene: LotjaGi1g1v0643200 | 16 | ||
| – | Pyridoxamine 5'-phosphate oxidase family protein; TAIR: AT2G04690.1 Pyridoxamine 5'-phosphate oxidase family protein; Swiss-Prot: sp|Q8IUH2|CREG2_HUMAN Protein CREG2; TrEMBL-Plants: tr|I3S4I1|I3S4I1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0251600 | 14 | ||
| – | Ribosomal RNA small subunit methyltransferase H; TAIR: AT2G04690.1 Pyridoxamine 5'-phosphate oxidase family protein; Swiss-Prot: sp|Q8IUH2|CREG2_HUMAN Protein CREG2; TrEMBL-Plants: tr|I3S4I1|I3S4I1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0255800_LC | 6 | ||
| – | Pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TAIR: AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein; Swiss-Prot: sp|Q9LU39|GLUBP_ARATH Glutamyl-tRNA reductase-binding protein, chloroplastic; TrEMBL-Plants: tr|I1KGP8|I1KGP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0345900 | 7 | ||
| – | Pyridoxine/pyridoxamine 5'-phosphate oxidase; TAIR: AT2G46580.1 Pyridoxamine 5'-phosphate oxidase family protein; Swiss-Prot: sp|Q9ZPY1|PPOX2_ARATH Pyridoxine/pyridoxamine 5'-phosphate oxidase 2; TrEMBL-Plants: tr|A0A072TP40|A0A072TP40_MEDTR Pyridoxamine 5'-phosphate oxidase family protein; Found in the gene: LotjaGi3g1v0398100 | 10 | ||
| – | Pentatricopeptide repeat (PPR) superfamily protein; TAIR: AT5G24060.2 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q0WMN5|Y3913_ARATH Uncharacterized protein At3g49140; TrEMBL-Plants: tr|K7MI02|K7MI02_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0118100 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 4.17 |