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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2055480 |
| Transcript ID | Lj3g3v2055480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: metal tolerance protein C4-like [Cicer arietinum] gi|502148041|ref|XP_004507015.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 94 | 94 | – | – | |
| PANTHER | 75 | 405 | 331 | 6.90E-185 | – | |
| SUPERFAMILY | 89 | 307 | 219 | 6.02E-31 | – | |
| Gene3D | 92 | 305 | 214 | 4.20E-29 | ||
| TIGRFAM | 93 | 354 | 262 | 3.00E-28 | ||
| Phobius | 95 | 115 | 21 | – | – | |
| Pfam | 98 | 299 | 202 | 5.80E-24 | ||
| Phobius | 116 | 120 | 5 | – | – | |
| Phobius | 121 | 143 | 23 | – | – | |
| Phobius | 144 | 162 | 19 | – | – | |
| Phobius | 163 | 180 | 18 | – | – | |
| TMHMM | 164 | 186 | 23 | – | – | |
| Phobius | 181 | 199 | 19 | – | – | |
| Phobius | 200 | 223 | 24 | – | – | |
| TMHMM | 201 | 223 | 23 | – | – | |
| Phobius | 224 | 254 | 31 | – | – | |
| TMHMM | 244 | 266 | 23 | – | – | |
| Phobius | 255 | 274 | 20 | – | – | |
| Phobius | 275 | 279 | 5 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 280 | 298 | 19 | – | – | |
| Phobius | 299 | 405 | 107 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2055480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2055480.1, powered by CORGI.
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