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Lj3g3v2318280.1

Overview

Field Value
Gene ID Lj3g3v2318280
Transcript ID Lj3g3v2318280.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein IQ-DOMAIN 14-like [Cicer arietinum] gi|502156120|ref|XP_004510319.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 54 54 – –
PANTHER
PTHR32295:SF10
1 381 381 1.40E-210 –
PANTHER
PTHR32295
1 381 381 1.40E-210 –
SMART
SM00015
115 137 23 0.007
IPR000048
ProSiteProfiles
PS50096
116 144 29 10.054
IPR000048
Pfam
PF00612
120 137 18 2.20E-05
IPR000048
SMART
SM00015
138 159 22 13
IPR000048
ProSiteProfiles
PS50096
140 167 28 9.157
IPR000048
Pfam
PF00612
143 157 15 7.70E-04
IPR000048
ProSiteProfiles
PS50096
164 193 30 6.559
IPR000048
Pfam
PF13178
299 373 75 7.40E-14
IPR025064
MobiDBLite
mobidb-lite
375 394 20 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj3g3v2318280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2318280.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.