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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2477710 |
| Transcript ID | Lj3g3v2477710.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ORM1-like protein 3-like [Cicer arietinum] gi|502156789|ref|XP_004510647.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 157 | 157 | 2.00E-128 | ||
| PANTHER | 1 | 157 | 157 | 2.00E-128 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PIRSF | 3 | 157 | 155 | 8.00E-63 | ||
| Pfam | 15 | 149 | 135 | 2.40E-51 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 21 | 45 | 25 | – | – | |
| Phobius | 46 | 50 | 5 | – | – | |
| TMHMM | 49 | 68 | 20 | – | – | |
| Phobius | 51 | 68 | 18 | – | – | |
| Phobius | 69 | 103 | 35 | – | – | |
| Phobius | 104 | 120 | 17 | – | – | |
| Phobius | 121 | 125 | 5 | – | – | |
| TMHMM | 126 | 143 | 18 | – | – | |
| Phobius | 126 | 143 | 18 | – | – | |
| Phobius | 144 | 157 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj3g3v2477710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2477710.1, powered by CORGI.
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