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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2515300 |
| Transcript ID | Lj3g3v2515300.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML31-like [Glycine max] gi|356563192|ref|XP_003549848.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 36 | 36 | 12.617 | ||
| PANTHER | 2 | 139 | 138 | 2.30E-59 | – | |
| PANTHER | 2 | 139 | 138 | 2.30E-59 | – | |
| SUPERFAMILY | 4 | 139 | 136 | 4.85E-35 | ||
| Gene3D | 4 | 59 | 56 | 1.20E-13 | ||
| SMART | 5 | 33 | 29 | 9.10E-04 | ||
| CDD | 5 | 66 | 62 | 8.65E-11 | ||
| Pfam | 9 | 28 | 20 | 8.10E-06 | ||
| ProSitePatterns | 14 | 26 | 13 | – | ||
| ProSiteProfiles | 37 | 72 | 36 | 11.445 | ||
| SMART | 41 | 69 | 29 | 0.024 | ||
| Pfam | 47 | 66 | 20 | 0.027 | ||
| ProSitePatterns | 50 | 62 | 13 | – | ||
| Gene3D | 60 | 80 | 21 | 0.001 | ||
| ProSiteProfiles | 73 | 108 | 36 | 12.951 | ||
| Pfam | 76 | 139 | 64 | 4.00E-14 | ||
| CDD | 77 | 139 | 63 | 4.63E-14 | ||
| SMART | 77 | 105 | 29 | 0.0046 | ||
| Gene3D | 81 | 139 | 59 | 3.90E-20 | ||
| ProSiteProfiles | 109 | 139 | 31 | 15.211 | ||
| SMART | 113 | 139 | 27 | 0.11 | ||
| ProSitePatterns | 122 | 134 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj3g3v2515300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2515300.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.