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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2531230 |
| Transcript ID | Lj3g3v2531230.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508703622|gb|EOX95518.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 12 | 30 | 19 | – | – | |
| Phobius | 31 | 49 | 19 | – | – | |
| PANTHER | 36 | 324 | 289 | 1.20E-138 | – | |
| PANTHER | 36 | 324 | 289 | 1.20E-138 | – | |
| Phobius | 50 | 78 | 29 | – | – | |
| TMHMM | 53 | 75 | 23 | – | – | |
| Pfam | 74 | 313 | 240 | 5.30E-65 | ||
| Phobius | 79 | 84 | 6 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 85 | 103 | 19 | – | – | |
| Phobius | 104 | 159 | 56 | – | – | |
| Phobius | 160 | 186 | 27 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 187 | 192 | 6 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 193 | 214 | 22 | – | – | |
| ProSiteProfiles | 200 | 269 | 70 | 10.402 | ||
| Phobius | 215 | 257 | 43 | – | – | |
| TMHMM | 258 | 280 | 23 | – | – | |
| Phobius | 258 | 288 | 31 | – | – | |
| Phobius | 289 | 335 | 47 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. |
Expression pattern of Lj3g3v2531230.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2531230.1, powered by CORGI.
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