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Lj3g3v2693160.2

Overview

Field Value
Gene ID Lj3g3v2693160
Transcript ID Lj3g3v2693160.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: calcineurin B-like protein 10-like [Glycine max] gi|356522538|ref|XP_003529903.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23056:SF26
78 290 213 1.10E-135 –
PANTHER
PTHR23056
78 290 213 1.10E-135 –
Gene3D
G3DSA:1.10.238.10
100 283 184 6.50E-49
IPR011992
SUPERFAMILY
SSF47473
102 282 181 9.47E-43
IPR011992
ProSiteProfiles
PS50222
147 182 36 12.421
IPR002048
SMART
SM00054
151 179 29 0.05
IPR002048
CDD
cd00051
152 213 62 1.86E-07
IPR002048
Pfam
PF13202
153 172 20 0.026
IPR002048
PRINTS
PR00450
155 176 22 2.40E-09 –
ProSiteProfiles
PS50222
184 219 36 11.556
IPR002048
Pfam
PF13499
187 256 70 6.10E-09
IPR002048
CDD
cd00051
188 257 70 1.10E-09
IPR002048
SMART
SM00054
188 216 29 3.6
IPR002048
PRINTS
PR00450
202 220 19 2.40E-09 –
ProSiteProfiles
PS50222
228 263 36 11.64
IPR002048
SMART
SM00054
232 260 29 0.005
IPR002048
ProSitePatterns
PS00018
241 253 13 –
IPR018247
PRINTS
PR00450
248 268 21 2.40E-09 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v2693160.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2693160.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.