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Lj3g3v2782650.1

Overview

Field Value
Gene ID Lj3g3v2782650
Transcript ID Lj3g3v2782650.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] gi|356549938|ref|XP_003543347.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 23 23
SignalP 1 21 21
PANTHER 5 127 123 2.80E-236
PANTHER 5 127 123 2.80E-236
SMART 55 368 314 3.00E-67
SUPERFAMILY 60 131 72 7.19E-58
Gene3D 62 371 310 1.00E-69
CDD 65 370 306 2.58E-69
ProSiteProfiles 66 370 305 45.313
Pfam 140 348 209 5.20E-37
PANTHER 161 390 230 2.80E-236
PANTHER 161 390 230 2.80E-236
SUPERFAMILY 163 372 210 7.19E-58
MobiDBLite 391 452 62

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.

Expression data

Expression pattern

Expression pattern of Lj3g3v2782650.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2782650.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.