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Lj3g3v2862520.1

Overview

Field Value
Gene ID Lj3g3v2862520
Transcript ID Lj3g3v2862520.1
Lotus japonicus genome version MG20 v3.0
Description Micronuclear linker histone polyprotein-like protein [Theobroma cacao] gi|508707434|gb|EOX99330.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 505 505 7.20E-92
Phobius 1 19 19
PANTHER 1 505 505 7.20E-92
TMHMM 20 42 23
Phobius 20 41 22
Phobius 42 508 467
Coils 68 88 21
Coils 96 144 49
Coils 148 168 21
MobiDBLite 191 227 37
MobiDBLite 245 401 157
MobiDBLite 434 508 75
Coils 481 501 21
Coils 508 508 1

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj3g3v2862520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v2862520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.