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| Field | Value |
|---|---|
| Gene ID | Lj3g3v2909700 |
| Transcript ID | Lj3g3v2909700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Aquaporin SIP1-1 [Medicago truncatula] gi|357471315|ref|XP_003605942.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 1 | 238 | 238 | 5.40E-93 | – | |
| PANTHER | 1 | 238 | 238 | 5.40E-93 | ||
| SUPERFAMILY | 2 | 233 | 232 | 6.67E-34 | ||
| Gene3D | 3 | 237 | 235 | 1.70E-34 | ||
| Pfam | 4 | 226 | 223 | 2.00E-15 | ||
| PRINTS | 5 | 24 | 20 | 1.60E-13 | ||
| Phobius | 7 | 28 | 22 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 29 | 39 | 11 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 40 | 67 | 28 | – | – | |
| PRINTS | 52 | 76 | 25 | 1.60E-13 | ||
| Phobius | 68 | 87 | 20 | – | – | |
| Phobius | 88 | 112 | 25 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| PRINTS | 92 | 111 | 20 | 1.60E-13 | ||
| Phobius | 113 | 131 | 19 | – | – | |
| TMHMM | 132 | 154 | 23 | – | – | |
| Phobius | 132 | 153 | 22 | – | – | |
| Phobius | 154 | 164 | 11 | – | – | |
| Phobius | 165 | 183 | 19 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| PRINTS | 169 | 191 | 23 | 1.60E-13 | ||
| Phobius | 184 | 207 | 24 | – | – | |
| Phobius | 208 | 229 | 22 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| PRINTS | 209 | 229 | 21 | 1.60E-13 | ||
| Phobius | 230 | 239 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v2909700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v2909700.1, powered by CORGI.
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