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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3006200 |
| Transcript ID | Lj3g3v3006200.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] gi|356539309|ref|XP_003538141.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 228 | 228 | 2.50E-284 | ||
| PANTHER | 1 | 228 | 228 | 2.50E-284 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Pfam | 16 | 374 | 359 | 1.80E-55 | ||
| Phobius | 21 | 41 | 21 | – | – | |
| Phobius | 42 | 46 | 5 | – | – | |
| Phobius | 47 | 68 | 22 | – | – | |
| TMHMM | 50 | 69 | 20 | – | – | |
| Phobius | 69 | 79 | 11 | – | – | |
| TMHMM | 74 | 91 | 18 | – | – | |
| Phobius | 80 | 98 | 19 | – | – | |
| Phobius | 99 | 109 | 11 | – | – | |
| Phobius | 110 | 129 | 20 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 130 | 135 | 6 | – | – | |
| Phobius | 136 | 154 | 19 | – | – | |
| Phobius | 155 | 159 | 5 | – | – | |
| TMHMM | 158 | 180 | 23 | – | – | |
| Phobius | 160 | 181 | 22 | – | – | |
| Phobius | 182 | 192 | 11 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 193 | 212 | 20 | – | – | |
| Phobius | 213 | 375 | 163 | – | – | |
| PANTHER | 247 | 375 | 129 | 2.50E-284 | ||
| PANTHER | 247 | 375 | 129 | 2.50E-284 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3006200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3006200.1, powered by CORGI.
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