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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3336280 |
| Transcript ID | Lj3g3v3336280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane protein 45B-like [Glycine max] gi|356545369|ref|XP_003541116.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 291 | 291 | 6.60E-132 | ||
| PANTHER | 1 | 291 | 291 | 6.60E-132 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 10 | 31 | 22 | – | – | |
| Phobius | 12 | 31 | 20 | – | – | |
| Phobius | 32 | 51 | 20 | – | – | |
| Phobius | 52 | 72 | 21 | – | – | |
| TMHMM | 52 | 74 | 23 | – | – | |
| Phobius | 73 | 91 | 19 | – | – | |
| TMHMM | 89 | 106 | 18 | – | – | |
| Phobius | 92 | 108 | 17 | – | – | |
| Phobius | 109 | 114 | 6 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 115 | 136 | 22 | – | – | |
| Pfam | 117 | 257 | 141 | 6.50E-46 | ||
| Phobius | 137 | 147 | 11 | – | – | |
| Phobius | 148 | 169 | 22 | – | – | |
| TMHMM | 148 | 170 | 23 | – | – | |
| Phobius | 170 | 175 | 6 | – | – | |
| Phobius | 176 | 199 | 24 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 200 | 241 | 42 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| Phobius | 242 | 261 | 20 | – | – | |
| Phobius | 262 | 293 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj3g3v3336280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3336280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.