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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3348660 |
| Transcript ID | Lj3g3v3348660.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | mTERF domain-containing protein [Medicago truncatula] gi|357473247|ref|XP_003606908.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 32 | 32 | 5 | – | |
| PANTHER | 21 | 430 | 410 | 0 | – | |
| PANTHER | 21 | 430 | 410 | 0 | – | |
| MobiDBLite | 97 | 129 | 33 | – | – | |
| Pfam | 225 | 357 | 133 | 5.00E-14 | ||
| SMART | 261 | 291 | 31 | 3100 | ||
| Pfam | 283 | 589 | 307 | 6.60E-66 | ||
| SMART | 296 | 326 | 31 | 3.70E-04 | ||
| SMART | 331 | 362 | 32 | 2.9 | ||
| SMART | 367 | 398 | 32 | 0.33 | ||
| SMART | 403 | 434 | 32 | 0.035 | ||
| SMART | 439 | 471 | 33 | 8.50E-05 | ||
| PANTHER | 468 | 626 | 159 | 0 | – | |
| PANTHER | 468 | 626 | 159 | 0 | – | |
| SMART | 476 | 507 | 32 | 0.16 | ||
| SMART | 512 | 542 | 31 | 0.058 | ||
| SMART | 544 | 575 | 32 | 0.032 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Double-stranded DNA binding | Interacting selectively and non-covalently with double-stranded DNA. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj3g3v3348660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3348660.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.