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Lj3g3v3557060.1

Overview

Field Value
Gene ID Lj3g3v3557060
Transcript ID Lj3g3v3557060.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein isoform 9 [Theobroma cacao] gi|508701286|gb|EOX93182.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 53 53
PANTHER 41 421 381 1.20E-167
PANTHER 41 421 381 1.20E-167
Coils 53 122 70
Coils 144 185 42
SUPERFAMILY 196 393 198 3.66E-06
Coils 200 234 35
Coils 238 265 28
Coils 280 300 21
Coils 312 349 38
Coils 357 391 35
SUPERFAMILY 362 578 217 1.11E-08
Coils 406 433 28
Coils 448 566 119
PANTHER 481 562 82 1.20E-167
PANTHER 481 562 82 1.20E-167
SUPERFAMILY 581 791 211 1.57E-06
PANTHER 586 798 213 1.20E-167
PANTHER 586 798 213 1.20E-167
Coils 595 629 35
Coils 644 678 35
Coils 721 804 84
SUPERFAMILY 734 968 235 3.92E-05
Coils 812 867 56
Coils 875 937 63
Coils 949 969 21
PANTHER 974 991 18 1.20E-167
PANTHER 974 991 18 1.20E-167

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj3g3v3557060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3557060.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.