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Lj3g3v3639220.1

Overview

Field Value
Gene ID Lj3g3v3639220
Transcript ID Lj3g3v3639220.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: nuclear anchorage protein 1-like [Cicer arietinum] gi|502146809|ref|XP_004506617.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 29 57 29 1.60E-115
PANTHER 29 57 29 1.60E-115
Coils 30 75 46
Coils 83 103 21
SUPERFAMILY 107 347 241 2.78E-10
Coils 118 201 84
MobiDBLite 136 161 26
Coils 212 271 60
MobiDBLite 216 238 23
MobiDBLite 266 314 49
PANTHER 270 349 80 1.60E-115
PANTHER 270 349 80 1.60E-115
Coils 300 355 56
Coils 363 470 108
PANTHER 379 596 218 1.60E-115
PANTHER 379 596 218 1.60E-115
Pfam 508 645 138 1.30E-23
Pfam 674 917 244 2.50E-47
PANTHER 748 965 218 1.60E-115
PANTHER 748 965 218 1.60E-115
MobiDBLite 1108 1141 34

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj3g3v3639220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3639220.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.