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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0072440 |
| Transcript ID | Lj4g3v0072440.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: Golgi apparatus membrane protein TVP38-like isoform X1 [Cicer arietinum] gi|502079930|ref|XP_004486411.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 314 | 314 | 7.50E-208 | ||
| Phobius | 1 | 61 | 61 | – | – | |
| PANTHER | 1 | 314 | 314 | 7.50E-208 | – | |
| MobiDBLite | 1 | 24 | 24 | – | – | |
| Phobius | 62 | 80 | 19 | – | – | |
| TMHMM | 62 | 84 | 23 | – | – | |
| Phobius | 81 | 99 | 19 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 100 | 121 | 22 | – | – | |
| Pfam | 121 | 241 | 121 | 1.10E-19 | ||
| Phobius | 122 | 132 | 11 | – | – | |
| TMHMM | 128 | 150 | 23 | – | – | |
| Phobius | 133 | 157 | 25 | – | – | |
| Phobius | 158 | 190 | 33 | – | – | |
| TMHMM | 191 | 213 | 23 | – | – | |
| Phobius | 191 | 211 | 21 | – | – | |
| Phobius | 212 | 217 | 6 | – | – | |
| Phobius | 218 | 238 | 21 | – | – | |
| TMHMM | 218 | 240 | 23 | – | – | |
| Phobius | 239 | 260 | 22 | – | – | |
| TMHMM | 260 | 282 | 23 | – | – | |
| Phobius | 261 | 282 | 22 | – | – | |
| Phobius | 283 | 314 | 32 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj4g3v0072440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0072440.1, powered by CORGI.
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