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Lj4g3v0083870.1

Overview

Field Value
Gene ID Lj4g3v0083870
Transcript ID Lj4g3v0083870.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: glutathione S-transferase zeta class-like isoform X2 [Cicer arietinum] gi|502126545|ref|XP_004499348.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.30.10
10 95 86 8.30E-30
IPR012336
SUPERFAMILY
SSF52833
13 100 88 1.20E-27
IPR012336
PANTHER
PTHR11260
15 224 210 1.30E-99 –
ProSiteProfiles
PS50404
15 96 82 25.541
IPR004045
PANTHER
PTHR11260:SF293
15 224 210 1.30E-99 –
SFLD
SFLDS00019
17 213 197 6.10E-32 –
CDD
cd03042
17 89 73 1.76E-37 –
TIGRFAM
TIGR01262
18 224 207 1.80E-74
IPR005955
Pfam
PF13417
19 95 77 4.50E-16
IPR004045
SUPERFAMILY
SSF47616
96 223 128 3.84E-29
IPR010987
Gene3D
G3DSA:1.20.1050.10
98 224 127 4.40E-43
IPR010987
ProSiteProfiles
PS50405
101 226 126 18.871
IPR010987
CDD
cd03191
104 221 118 4.63E-53 –
Pfam
PF14497
139 215 77 1.70E-05
IPR004046

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0009072
Biological process Aromatic amino acid family metabolic process The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj4g3v0083870.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0083870.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.