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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0109450 |
| Transcript ID | Lj4g3v0109450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: oligopeptide transporter 3-like [Cicer arietinum] gi|502149608|ref|XP_004507597.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | – | – | |
| MobiDBLite | 1 | 27 | 27 | – | – | |
| PANTHER | 25 | 554 | 530 | 0 | – | |
| PANTHER | 25 | 554 | 530 | 0 | – | |
| TIGRFAM | 26 | 554 | 529 | 1.90E-146 | ||
| TIGRFAM | 32 | 554 | 523 | 2.50E-143 | ||
| Pfam | 48 | 554 | 507 | 3.00E-136 | ||
| TMHMM | 48 | 70 | 23 | – | – | |
| Phobius | 50 | 70 | 21 | – | – | |
| Phobius | 71 | 76 | 6 | – | – | |
| Phobius | 77 | 96 | 20 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 97 | 157 | 61 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 158 | 178 | 21 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 179 | 220 | 42 | – | – | |
| Phobius | 221 | 254 | 34 | – | – | |
| TMHMM | 227 | 249 | 23 | – | – | |
| Phobius | 255 | 265 | 11 | – | – | |
| TMHMM | 262 | 284 | 23 | – | – | |
| Phobius | 266 | 284 | 19 | – | – | |
| Phobius | 285 | 295 | 11 | – | – | |
| TMHMM | 294 | 316 | 23 | – | – | |
| Phobius | 296 | 318 | 23 | – | – | |
| Phobius | 319 | 368 | 50 | – | – | |
| Phobius | 369 | 391 | 23 | – | – | |
| TMHMM | 369 | 391 | 23 | – | – | |
| Phobius | 392 | 424 | 33 | – | – | |
| TMHMM | 425 | 444 | 20 | – | – | |
| Phobius | 425 | 445 | 21 | – | – | |
| Phobius | 446 | 450 | 5 | – | – | |
| Phobius | 451 | 473 | 23 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 474 | 554 | 81 | – | – | |
| TMHMM | 483 | 505 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0109450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0109450.1, powered by CORGI.
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