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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0119990 |
| Transcript ID | Lj4g3v0119990.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tonoplast malate transporter/sodium dicarboxylate symporter [Medicago truncatula] gi|357480493|ref|XP_003610532.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | – | – | |
| PANTHER | 1 | 28 | 28 | 2.50E-224 | – | |
| PANTHER | 1 | 28 | 28 | 2.50E-224 | – | |
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 46 | 64 | 19 | – | – | |
| Pfam | 54 | 526 | 473 | 3.20E-64 | ||
| TIGRFAM | 65 | 519 | 455 | 2.50E-60 | ||
| Phobius | 65 | 83 | 19 | – | – | |
| PANTHER | 68 | 534 | 467 | 2.50E-224 | – | |
| PANTHER | 68 | 534 | 467 | 2.50E-224 | – | |
| CDD | 75 | 530 | 456 | 1.49E-52 | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 84 | 106 | 23 | – | – | |
| Phobius | 107 | 117 | 11 | – | – | |
| TMHMM | 117 | 136 | 20 | – | – | |
| Phobius | 118 | 136 | 19 | – | – | |
| Phobius | 137 | 161 | 25 | – | – | |
| Phobius | 162 | 195 | 34 | – | – | |
| Phobius | 196 | 214 | 19 | – | – | |
| Phobius | 215 | 239 | 25 | – | – | |
| TMHMM | 219 | 241 | 23 | – | – | |
| Phobius | 240 | 258 | 19 | – | – | |
| Phobius | 259 | 283 | 25 | – | – | |
| TMHMM | 261 | 283 | 23 | – | – | |
| Phobius | 284 | 303 | 20 | – | – | |
| Phobius | 304 | 330 | 27 | – | – | |
| TMHMM | 304 | 326 | 23 | – | – | |
| Phobius | 331 | 341 | 11 | – | – | |
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 342 | 364 | 23 | – | – | |
| Phobius | 365 | 384 | 20 | – | – | |
| TMHMM | 383 | 405 | 23 | – | – | |
| Phobius | 385 | 402 | 18 | – | – | |
| Phobius | 403 | 421 | 19 | – | – | |
| TMHMM | 420 | 442 | 23 | – | – | |
| Phobius | 422 | 442 | 21 | – | – | |
| Phobius | 443 | 462 | 20 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 463 | 482 | 20 | – | – | |
| Phobius | 483 | 511 | 29 | – | – | |
| TMHMM | 512 | 531 | 20 | – | – | |
| Phobius | 512 | 532 | 21 | – | – | |
| Phobius | 533 | 549 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0119990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0119990.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.