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Lj4g3v0151500.1

Overview

Field Value
Gene ID Lj4g3v0151500
Transcript ID Lj4g3v0151500.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ankyrin repeat domain-containing protein 13B-like [Glycine max] gi|356564488|ref|XP_003550486.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12447
44 345 302 4.00E-211
IPR021832
PANTHER
PTHR12447:SF7
44 345 302 4.00E-211 –
MobiDBLite
mobidb-lite
44 63 20 – –
CDD
cd00204
67 179 113 1.76E-06 –
SUPERFAMILY
SSF48403
67 202 136 4.59E-09
IPR020683
Gene3D
G3DSA:1.25.40.20
125 181 57 1.30E-07
IPR020683
ProSiteProfiles
PS50297
125 180 56 11.957
IPR020683
ProSiteProfiles
PS50088
125 157 33 10.606
IPR002110
Pfam
PF11904
242 363 122 2.20E-30
IPR021832
MobiDBLite
mobidb-lite
363 388 26 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj4g3v0151500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0151500.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.