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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0338180 |
| Transcript ID | Lj4g3v0338180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: rae1-like protein At1g80670-like [Glycine max] gi|356558620|ref|XP_003547602.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 1 | 335 | 335 | 1.20E-241 | – | |
| PANTHER | 1 | 335 | 335 | 1.20E-241 | – | |
| SMART | 9 | 51 | 43 | 3.60E-04 | ||
| Gene3D | 18 | 305 | 288 | 7.90E-67 | ||
| ProSiteProfiles | 19 | 52 | 34 | 9.773 | ||
| ProSiteProfiles | 19 | 278 | 260 | 29.345 | ||
| SUPERFAMILY | 20 | 301 | 282 | 2.44E-54 | ||
| Pfam | 24 | 50 | 27 | 3.60E-04 | ||
| PRINTS | 38 | 52 | 15 | 1.10E-05 | ||
| SMART | 57 | 95 | 39 | 4.10E-04 | ||
| ProSiteProfiles | 63 | 104 | 42 | 10.709 | ||
| Pfam | 65 | 94 | 30 | 0.013 | ||
| SMART | 98 | 137 | 40 | 7.00E-07 | ||
| ProSiteProfiles | 105 | 146 | 42 | 14.753 | ||
| Pfam | 108 | 137 | 30 | 2.50E-04 | ||
| PRINTS | 124 | 138 | 15 | 1.10E-05 | ||
| SMART | 140 | 176 | 37 | 150 | ||
| SMART | 181 | 220 | 40 | 280 | ||
| SMART | 225 | 269 | 45 | 0.0039 | ||
| Pfam | 230 | 269 | 40 | 0.031 | ||
| ProSiteProfiles | 244 | 278 | 35 | 9.807 | ||
| PRINTS | 256 | 270 | 15 | 1.10E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0338180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0338180.1, powered by CORGI.
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