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Lj4g3v0341230.1

Overview

Field Value
Gene ID Lj4g3v0341230
Transcript ID Lj4g3v0341230.1
Lotus japonicus genome version MG20 v3.0
Description 2-nitropropane dioxygenase-like protein [Medicago truncatula] gi|357460979|ref|XP_003600771.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32332:SF20
3 326 324 2.30E-137 –
PANTHER
PTHR32332
3 326 324 2.30E-137 –
SUPERFAMILY
SSF51412
5 327 323 1.08E-58 –
Gene3D
G3DSA:3.20.20.70
5 314 310 4.40E-76
IPR013785
Pfam
PF03060
6 72 67 5.30E-14
IPR004136
CDD
cd04730
10 234 225 3.23E-77 –
Pfam
PF03060
78 319 242 2.50E-45
IPR004136

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0018580
Molecular function Nitronate monooxygenase activity Catalysis of the reaction: ethylnitronate + O(2) = acetaldehyde + nitrite.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj4g3v0341230.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0341230.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.