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Lj4g3v0363530.1

Overview

Field Value
Gene ID Lj4g3v0363530
Transcript ID Lj4g3v0363530.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Glycine max] gi|356551124|ref|XP_003543928.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 115 115
PANTHER 75 232 158 1.30E-94
PANTHER 75 232 158 1.30E-94
CDD 111 232 122 6.19E-20
Phobius 116 135 20
TMHMM 118 140 23
Phobius 136 141 6
Phobius 142 161 20
TMHMM 145 162 18
Phobius 162 191 30
TMHMM 189 211 23
Phobius 192 212 21
Phobius 213 257 45
TMHMM 218 235 18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj4g3v0363530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0363530.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.