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Lj4g3v0507990.1

Overview

Field Value
Gene ID Lj4g3v0507990
Transcript ID Lj4g3v0507990.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like [Cicer arietinum] gi|502142881|ref|XP_004505139.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12655
1 472 472 4.80E-303 –
PANTHER
PTHR12655:SF3
1 472 472 4.80E-303 –
MobiDBLite
mobidb-lite
40 79 40 – –
SUPERFAMILY
SSF101447
50 58 9 2.25E-06 –
ProSiteProfiles
PS51770
130 252 123 21.712
IPR033120
CDD
cd03442
134 260 127 1.16E-27 –
SUPERFAMILY
SSF54637
136 287 152 6.85E-27
IPR029069
Gene3D
G3DSA:3.10.129.10
137 291 155 6.70E-42
IPR029069
MobiDBLite
mobidb-lite
278 298 21 – –
Gene3D
G3DSA:3.10.129.10
314 467 154 2.80E-37
IPR029069
CDD
cd03442
324 438 115 2.79E-27 –
SUPERFAMILY
SSF54637
326 464 139 2.26E-21
IPR029069
ProSiteProfiles
PS51770
327 444 118 27.262
IPR033120

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj4g3v0507990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0507990.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.