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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029069
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 53 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.460s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0066299.1
n.a. Esterase ydiI [Medicago truncatula] gi|357450257|ref|XP_003595405.1| chr0 23280146 23281536 -
3 domain predictions
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Lj0g3v0066299.2
n.a. Thioesterase superfamily protein [Theobroma cacao] gi|508715055|gb|EOY06952.1| chr0 23280146 23281932 -
3 domain predictions
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Lj0g3v0119999.1
n.a. PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cicer arietinum] gi|502149670|ref|XP_004507621.1| chr0 53270952 53275502 +
3 domain predictions
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Lj0g3v0131499.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera] gi|225453708|ref|XP_002271066.1| chr0 59823003 59825887 +
3 domain predictions
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Lj0g3v0161459.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 8-like [Glycine max] gi|356520412|ref|XP_003528856.1| chr0 75948367 75955764 +
3 domain predictions
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Lj0g3v0161459.2
n.a. PREDICTED: acyl-coenzyme A thioesterase 8-like [Glycine max] gi|356520412|ref|XP_003528856.1| chr0 75948367 75955764 +
3 domain predictions
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Lj0g3v0246559.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13-like [Cicer arietinum] gi|502095928|ref|XP_004490572.1| chr0 127759791 127762885 +
3 domain predictions
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Lj0g3v0339359.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13-like [Cicer arietinum] gi|502095928|ref|XP_004490572.1| chr0 177750029 177752864 -
3 domain predictions
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Lj1g3v1386400.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13-like [Glycine max] gi|356508896|ref|XP_003523189.1| chr1 16899926 16902091 -
3 domain predictions
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Lj1g3v1498440.1
n.a. Myristoyl-acyl carrier protein thioesterase [Medicago truncatula] gi|357465015|ref|XP_003602789.1| chr1 17865828 17868451 +
3 domain predictions
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Lj1g3v1498440.2
n.a. PREDICTED: myristoyl-acyl carrier protein thioesterase, chloroplastic-like [Glycine max] gi|356516529|ref|XP_003526946.1| chr1 17866192 17868451 +
3 domain predictions
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Lj1g3v2268360.1
n.a. PREDICTED: enoyl-CoA hydratase 2, peroxisomal-like [Cicer arietinum] gi|502131168|ref|XP_004500898.1| chr1 26692111 26695893 -
3 domain predictions
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Lj1g3v2609210.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera] gi|225453708|ref|XP_002271066.1| chr1 30112922 30115878 +
3 domain predictions
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Lj1g3v2658230.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 8-like isoform 1 [Glycine max] gi|356532006|ref|XP_003534565.1| chr1 30960001 30969944 -
3 domain predictions
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Lj1g3v2896060.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like [Glycine max] gi|356531846|ref|XP_003534487.1| chr1 32606873 32611633 -
3 domain predictions
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Lj1g3v2953590.2
n.a. PREDICTED: enoyl-CoA hydratase 2, peroxisomal-like [Glycine max] gi|356508947|ref|XP_003523214.1| chr1 33567349 33568571 -
2 domain predictions
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Lj1g3v3557070.1
n.a. PREDICTED: oleoyl-acyl carrier protein thioesterase 1, chloroplastic-like [Cicer arietinum] gi|502100391|ref|XP_004491706.1| chr1 40876639 40882072 -
3 domain predictions
 –
Lj2g3v1142960.1
n.a. Thioesterase-like protein [Medicago truncatula] gi|357488675|ref|XP_003614625.1| chr2 18100679 18104498 -
3 domain predictions
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Lj2g3v1144100.1
n.a. Thioesterase-like protein [Medicago truncatula] gi|357488675|ref|XP_003614625.1| chr2 18120030 18123004 +
3 domain predictions
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Lj2g3v2986030.1
n.a. PREDICTED: LOW QUALITY PROTEIN: (R)-specific enoyl-CoA hydratase-like [Cicer arietinum] gi|502098244|ref|XP_004491188.1| chr2 38584145 38586220 +
3 domain predictions
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Lj3g3v2314120.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera] gi|225442579|ref|XP_002279118.1| chr3 28197790 28198675 +
3 domain predictions
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Lj4g3v0340700.2
n.a. PREDICTED: (3R)-hydroxymyristoyl-[acyl]-carrier-protein] gi|356558645|ref|XP_003547614.1| chr4 4395838 4398600 -
3 domain predictions
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Lj4g3v0507990.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like [Cicer arietinum] gi|502142881|ref|XP_004505139.1| chr4 8530657 8535222 +
3 domain predictions
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Lj4g3v0509020.1
n.a. Acyl-coenzyme A thioesterase [Medicago truncatula] gi|357475683|ref|XP_003608127.1| chr4 8557361 8558890 -
3 domain predictions
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Lj4g3v0509030.1
n.a. Acyl-coenzyme A thioesterase [Medicago truncatula] gi|357475685|ref|XP_003608128.1| chr4 8558890 8561587 -
3 domain predictions
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Lj5g3v2169500.1
n.a. PREDICTED: myristoyl-acyl carrier protein thioesterase, chloroplastic-like [Glycine max] gi|356574254|ref|XP_003555265.1| chr5 31121207 31123496 +
3 domain predictions
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LotjaGi1g1v0055800.1
n.a. (R)-specific enoyl-CoA hydratase; TAIR: AT5G60335.1 hydroxyacyl-thioester dehydratase type-like protein; Swiss-Prot: sp|O32472|PHAJ_AERCA (R)-specific enoyl-CoA hydratase; TrEMBL-Plants: tr|I3TA16|I3TA16_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0055800 LjG1.1_chr1 7844518 7846844 -
2 domain predictions
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LotjaGi1g1v0124000.1
n.a. Acyl-CoA thioesterase, putative; TAIR: AT2G29590.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|C6SWR6|C6SWR6_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0124000 LjG1.1_chr1 19658415 19661588 +
2 domain predictions
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LotjaGi1g1v0203200.1
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SQI3|FATB_GOSHI Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A151SLK9|A0A151SLK9_CAJCA Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi1g1v0203200 LjG1.1_chr1 43635648 43640347 -
2 domain predictions
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LotjaGi1g1v0203200.2
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SQI3|FATB_GOSHI Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A151SLK9|A0A151SLK9_CAJCA Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi1g1v0203200 LjG1.1_chr1 43636168 43639485 -
2 domain predictions
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LotjaGi1g1v0330100.1
n.a. Acyl-CoA thioesterase, putative; TAIR: AT1G04290.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SFW7|I3SFW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0330100 LjG1.1_chr1 78588405 78595940 -
2 domain predictions
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LotjaGi1g1v0330100.2
n.a. Acyl-CoA thioesterase, putative; TAIR: AT1G04290.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SFW7|I3SFW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0330100 LjG1.1_chr1 78594163 78595693 -
2 domain predictions
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LotjaGi1g1v0336700.1
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A0S3RG22|A0A0S3RG22_PHAAN Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi1g1v0336700 LjG1.1_chr1 79666263 79669647 +
2 domain predictions
 –
LotjaGi1g1v0336700.2
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A1J7G9P0|A0A1J7G9P0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0336700 LjG1.1_chr1 79666263 79669647 +
2 domain predictions
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LotjaGi1g1v0336700.3
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SJE2|FATB_ARATH Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A0S3RG22|A0A0S3RG22_PHAAN Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi1g1v0336700 LjG1.1_chr1 79666423 79669557 +
2 domain predictions
 –
LotjaGi1g1v0433800.1
n.a. Enoyl-CoA hydratase 2, peroxisomal; TAIR: AT1G76150.1 enoyl-CoA hydratase 2; Swiss-Prot: sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal; TrEMBL-Plants: tr|I3S384|I3S384_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0433800 LjG1.1_chr1 92842595 92854110 -
2 domain predictions
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LotjaGi1g1v0433800.2
n.a. Enoyl-CoA hydratase 2, peroxisomal protein; TAIR: AT1G76150.1 enoyl-CoA hydratase 2; Swiss-Prot: sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal; TrEMBL-Plants: tr|I3S384|I3S384_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0433800 LjG1.1_chr1 92849636 92854081 -
2 domain predictions
 –
LotjaGi1g1v0467300.1
n.a. Acyl-CoA thioesterase; TAIR: AT3G61200.1 Thioesterase superfamily protein; Swiss-Prot: sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6; TrEMBL-Plants: tr|A0A151TBD2|A0A151TBD2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0467300 LjG1.1_chr1 97716260 97719689 +
2 domain predictions
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LotjaGi1g1v0475300.1
n.a. Acyl-CoA thioesterase; TAIR: AT1G01710.1 acyl-CoA thioesterase II; Swiss-Prot: sp|P58137|ACOT8_MOUSE Acyl-coenzyme A thioesterase 8; TrEMBL-Plants: tr|A0A0L9TCU4|A0A0L9TCU4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0475300 LjG1.1_chr1 98611090 98618638 -
2 domain predictions
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LotjaGi1g1v0490500.1
n.a. Acyl-coenzyme A thioesterase 9, mitochondrial; TAIR: AT5G48370.1 Thioesterase/thiol ester dehydrase-isomerase superfamily protein; Swiss-Prot: sp|Q9Y305|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial; TrEMBL-Plants: tr|I1N434|I1N434_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0490500 LjG1.1_chr1 100397998 100401839 -
2 domain predictions
 –
LotjaGi1g1v0590200.1
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT3G25110.1 fatA acyl-ACP thioesterase; Swiss-Prot: sp|Q42561|FATA1_ARATH Oleoyl-acyl carrier protein thioesterase 1, chloroplastic; TrEMBL-Plants: tr|A0A1J7H457|A0A1J7H457_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0590200 LjG1.1_chr1 113003675 113009330 -
2 domain predictions
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LotjaGi2g1v0276300.1
n.a. Thioesterase-like protein; TAIR: AT1G68260.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q8W583|ALT3_ARATH Acyl-acyl carrier protein thioesterase ATL3, chloroplastic; TrEMBL-Plants: tr|G7K1I9|G7K1I9_MEDTR Pollen thioesterase; Found in the gene: LotjaGi2g1v0276300 LjG1.1_chr2 74804229 74808834 +
2 domain predictions
 –
LotjaGi2g1v0276300.2
n.a. Thioesterase-like protein; TAIR: AT1G68260.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q8W583|ALT3_ARATH Acyl-acyl carrier protein thioesterase ATL3, chloroplastic; TrEMBL-Plants: tr|G7K1I9|G7K1I9_MEDTR Pollen thioesterase; Found in the gene: LotjaGi2g1v0276300 LjG1.1_chr2 74804241 74808866 +
2 domain predictions
 –
LotjaGi3g1v0367700.1
n.a. Thioesterase family protein; TAIR: AT3G16175.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SLW7|I3SLW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0367700 LjG1.1_chr3 75361722 75377874 +
2 domain predictions
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LotjaGi3g1v0367700.2
n.a. Thioesterase family protein; TAIR: AT3G16175.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SLW7|I3SLW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0367700 LjG1.1_chr3 75361722 75377874 +
2 domain predictions
 –
LotjaGi3g1v0377800.1
n.a. Acyl-CoA thioesterase; TAIR: AT3G61200.1 Thioesterase superfamily protein; Swiss-Prot: sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6; TrEMBL-Plants: tr|I3S8B6|I3S8B6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0377800 LjG1.1_chr3 77052613 77059846 -
2 domain predictions
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LotjaGi3g1v0382800.1
n.a. Acyl-CoA thioesterase; TAIR: AT1G01710.1 acyl-CoA thioesterase II; Swiss-Prot: sp|O14734|ACOT8_HUMAN Acyl-coenzyme A thioesterase 8; TrEMBL-Plants: tr|I1JK89|I1JK89_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0382800 LjG1.1_chr3 77681039 77688738 -
2 domain predictions
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LotjaGi4g1v0033600.1
n.a. 3-hydroxyacyl-[acyl]-carrier-protein] dehydratase FabZ; TAIR: AT5G10160.1 Thioesterase superfamily protein; Swiss-Prot: sp|P73848|FABZ_SYNY3 3-hydroxyacyl-[acyl]-carrier-protein] dehydratase FabZ; TrEMBL-Plants: tr|I3T5Z3|I3T5Z3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0033600 LjG1.1_chr4 4093413 4096991 -
2 domain predictions
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LotjaGi4g1v0066800.1
n.a. Acyl-coenzyme A thioesterase 9, mitochondrial; TAIR: AT2G30720.1 Thioesterase/thiol ester dehydrase-isomerase superfamily protein; Swiss-Prot: sp|Q9Y305|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial; TrEMBL-Plants: tr|I1JF18|I1JF18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0066800 LjG1.1_chr4 8347670 8352318 +
2 domain predictions
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LotjaGi4g1v0264500.1
n.a. Acyl-[acyl]-carrier-protein] hydrolase; TAIR: AT1G08510.1 fatty acyl-ACP thioesterases B; Swiss-Prot: sp|Q9SQI3|FATB_GOSHI Palmitoyl-acyl carrier protein thioesterase, chloroplastic; TrEMBL-Plants: tr|A0A151SLK9|A0A151SLK9_CAJCA Acyl-[acyl]-carrier-protein] hydrolase; Found in the gene: LotjaGi4g1v0264500 LjG1.1_chr4 62882609 62888384 +
2 domain predictions
 –