Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v0510130.2

Overview

Field Value
Gene ID Lj4g3v0510130
Transcript ID Lj4g3v0510130.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable phosphoinositide phosphatase SAC9-like [Cicer arietinum] gi|502142904|ref|XP_004505147.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 189 189 2.80E-272
PANTHER 1 189 189 2.80E-272
ProSiteProfiles 14 390 377 34.678
Pfam 16 259 244 5.80E-39
PANTHER 207 288 82 2.80E-272
PANTHER 207 288 82 2.80E-272
PANTHER 306 354 49 2.80E-272
PANTHER 306 354 49 2.80E-272
SUPERFAMILY 373 409 37 4.64E-11
ProSiteProfiles 376 410 35 15.998
Gene3D 377 410 34 4.00E-17
SMART 377 410 34 3.60E-11
Pfam 378 408 31 1.80E-11
CDD 379 410 32 5.32E-10
ProSitePatterns 382 408 27
PANTHER 424 698 275 2.80E-272
PANTHER 424 698 275 2.80E-272
MobiDBLite 737 761 25
Coils 847 867 21
PANTHER 1457 1480 24 2.80E-272
PANTHER 1457 1480 24 2.80E-272
Coils 1497 1501 5

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function Phosphoric ester hydrolase activity Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.

Expression data

Expression pattern

Expression pattern of Lj4g3v0510130.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0510130.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.