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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0633540 |
| Transcript ID | Lj4g3v0633540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable aquaporin NIP-type-like [Cicer arietinum] gi|502143225|ref|XP_004505265.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 227 | 227 | 8.50E-125 | ||
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 1 | 227 | 227 | 8.50E-125 | – | |
| Gene3D | 30 | 67 | 38 | 8.50E-05 | ||
| SUPERFAMILY | 30 | 215 | 186 | 9.68E-46 | ||
| PRINTS | 33 | 52 | 20 | 1.70E-20 | ||
| Phobius | 35 | 55 | 21 | – | – | |
| Phobius | 56 | 66 | 11 | – | – | |
| Phobius | 67 | 95 | 29 | – | – | |
| Gene3D | 73 | 213 | 141 | 5.80E-38 | ||
| Pfam | 73 | 202 | 130 | 2.00E-33 | ||
| TMHMM | 73 | 95 | 23 | – | – | |
| Phobius | 96 | 114 | 19 | – | – | |
| TMHMM | 110 | 132 | 23 | – | – | |
| Phobius | 115 | 133 | 19 | – | – | |
| Phobius | 134 | 144 | 11 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 145 | 164 | 20 | – | – | |
| PRINTS | 148 | 170 | 23 | 1.70E-20 | ||
| Phobius | 165 | 183 | 19 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 205 | 22 | – | – | |
| PRINTS | 185 | 205 | 21 | 1.70E-20 | ||
| Phobius | 206 | 230 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0633540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0633540.1, powered by CORGI.
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