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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0654420 |
| Transcript ID | Lj4g3v0654420.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RuBisCO large subunit-binding protein subunit alpha [Medicago truncatula] gi|357475213|ref|XP_003607892.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 589 | 579 | 0 | – | |
| PANTHER | 11 | 589 | 579 | 0 | – | |
| Gene3D | 42 | 235 | 194 | 1.10E-36 | ||
| TIGRFAM | 51 | 573 | 523 | 1.80E-191 | ||
| CDD | 52 | 572 | 521 | 0 | – | |
| SUPERFAMILY | 59 | 185 | 127 | 1.75E-61 | – | |
| Pfam | 71 | 573 | 503 | 2.90E-91 | ||
| PRINTS | 75 | 101 | 27 | 3.00E-45 | ||
| PRINTS | 130 | 157 | 28 | 3.00E-45 | ||
| SUPERFAMILY | 184 | 245 | 62 | 3.36E-12 | – | |
| SUPERFAMILY | 232 | 423 | 192 | 2.41E-62 | ||
| Gene3D | 236 | 417 | 182 | 1.30E-68 | ||
| PRINTS | 315 | 338 | 24 | 3.00E-45 | ||
| PRINTS | 397 | 422 | 26 | 3.00E-45 | ||
| SUPERFAMILY | 411 | 456 | 46 | 1.31E-11 | – | |
| Gene3D | 418 | 566 | 149 | 8.90E-32 | ||
| PRINTS | 445 | 466 | 22 | 3.00E-45 | ||
| SUPERFAMILY | 456 | 570 | 115 | 1.75E-61 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of Lj4g3v0654420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0654420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.