Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v0758120.1

Overview

Field Value
Gene ID Lj4g3v0758120
Transcript ID Lj4g3v0758120.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: adenylyl-sulfate kinase, chloroplastic-like [Glycine max] gi|356511963|ref|XP_003524691.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11055:SF21
1 315 315 1.20E-184 –
PANTHER
PTHR11055
1 315 315 1.20E-184 –
Gene3D
G3DSA:3.40.50.300
115 315 201 1.80E-90
IPR027417
TIGRFAM
TIGR00455
121 302 182 2.10E-77
IPR002891
Hamap
MF_00065
137 312 176 35.813
IPR002891
SUPERFAMILY
SSF52540
137 310 174 2.82E-34
IPR027417
Pfam
PF01583
138 291 154 5.20E-72 –
CDD
cd02027
141 287 147 9.04E-101
IPR002891

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000103
Biological process Sulfate assimilation The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
Subterm of
GO:0004020
Molecular function Adenylylsulfate kinase activity Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj4g3v0758120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0758120.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.