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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1073510 |
| Transcript ID | Lj4g3v1073510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML21-like isoform X2 [Cicer arietinum] gi|502154209|ref|XP_004509621.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 20 | 215 | 196 | 2.90E-39 | ||
| PANTHER | 25 | 119 | 95 | 1.40E-41 | – | |
| PANTHER | 25 | 119 | 95 | 1.40E-41 | – | |
| ProSiteProfiles | 54 | 89 | 36 | 13.202 | ||
| SUPERFAMILY | 56 | 221 | 166 | 2.07E-31 | ||
| CDD | 58 | 119 | 62 | 1.21E-11 | ||
| SMART | 58 | 86 | 29 | 2.30E-04 | ||
| Pfam | 58 | 117 | 60 | 1.10E-08 | ||
| ProSitePatterns | 67 | 79 | 13 | – | ||
| ProSiteProfiles | 90 | 125 | 36 | 8.125 | ||
| SMART | 94 | 122 | 29 | 16 | ||
| PANTHER | 136 | 223 | 88 | 1.40E-41 | – | |
| PANTHER | 136 | 223 | 88 | 1.40E-41 | – | |
| ProSiteProfiles | 145 | 180 | 36 | 10.552 | ||
| Pfam | 148 | 212 | 65 | 6.40E-08 | ||
| SMART | 149 | 177 | 29 | 0.078 | ||
| CDD | 150 | 213 | 64 | 6.58E-07 | ||
| ProSitePatterns | 158 | 170 | 13 | – | ||
| ProSiteProfiles | 183 | 218 | 36 | 9.939 | ||
| SMART | 187 | 215 | 29 | 2.6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj4g3v1073510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1073510.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.