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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1388360 |
| Transcript ID | Lj4g3v1388360.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML31-like [Glycine max] gi|356563192|ref|XP_003549848.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 2 | 37 | 36 | 13.091 | ||
| PANTHER | 3 | 140 | 138 | 2.50E-57 | – | |
| PANTHER | 3 | 140 | 138 | 2.50E-57 | – | |
| Gene3D | 5 | 56 | 52 | 4.90E-14 | ||
| SUPERFAMILY | 5 | 140 | 136 | 5.44E-35 | ||
| SMART | 6 | 34 | 29 | 0.0053 | ||
| CDD | 6 | 67 | 62 | 5.05E-11 | ||
| Pfam | 10 | 29 | 20 | 6.70E-06 | ||
| ProSitePatterns | 15 | 27 | 13 | – | ||
| ProSiteProfiles | 38 | 73 | 36 | 11.919 | ||
| SMART | 42 | 70 | 29 | 0.009 | ||
| Pfam | 48 | 67 | 20 | 0.0094 | ||
| ProSitePatterns | 51 | 63 | 13 | – | ||
| Gene3D | 57 | 140 | 84 | 3.20E-22 | ||
| ProSiteProfiles | 74 | 109 | 36 | 12.728 | ||
| Pfam | 77 | 140 | 64 | 4.90E-14 | ||
| SMART | 78 | 106 | 29 | 0.01 | ||
| CDD | 78 | 140 | 63 | 1.51E-13 | ||
| ProSiteProfiles | 110 | 140 | 31 | 15.211 | ||
| SMART | 114 | 140 | 27 | 0.11 | ||
| ProSitePatterns | 123 | 135 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj4g3v1388360.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1388360.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.