Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v1683160.1

Overview

Field Value
Gene ID Lj4g3v1683160
Transcript ID Lj4g3v1683160.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dCTP pyrophosphatase 1-like [Glycine max] gi|356514296|ref|XP_003525842.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR14552
1 126 126 1.60E-87 –
PANTHER
PTHR14552:SF16
1 126 126 1.60E-87 –
PIRSF
PIRSF029826
7 128 122 3.70E-45
IPR011394
ProSiteProfiles
PS50912
12 61 50 9.611
IPR009039
Gene3D
G3DSA:1.10.287.1080
13 110 98 1.30E-29 –
SUPERFAMILY
SSF101386
16 119 104 7.27E-33 –
CDD
cd11537
22 111 90 3.48E-45
IPR025984
Pfam
PF12643
49 124 76 8.70E-12
IPR025984

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009143
Biological process Nucleoside triphosphate catabolic process The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.
Subterm of
GO:0047429
Molecular function Nucleoside-triphosphate diphosphatase activity Catalysis of the reaction: H2O + a nucleoside triphosphate = diphosphate + a nucleotide.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj4g3v1683160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1683160.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.