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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1719720 |
| Transcript ID | Lj4g3v1719720.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: respiratory burst oxidase homolog protein A-like isoform X1 [Cicer arietinum] gi|502151918|ref|XP_004508677.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 283 | 283 | – | – | |
| Pfam | 65 | 162 | 98 | 1.80E-18 | ||
| PANTHER | 67 | 800 | 734 | 0 | – | |
| PANTHER | 67 | 800 | 734 | 0 | – | |
| SUPERFAMILY | 83 | 233 | 151 | 4.56E-13 | ||
| Gene3D | 86 | 235 | 150 | 1.10E-09 | ||
| SFLD | 110 | 798 | 689 | 0 | – | |
| SFLD | 277 | 796 | 520 | 0 | – | |
| TMHMM | 279 | 301 | 23 | – | – | |
| Phobius | 284 | 302 | 19 | – | – | |
| Phobius | 303 | 422 | 120 | – | – | |
| Pfam | 322 | 479 | 158 | 1.00E-17 | ||
| TMHMM | 362 | 384 | 23 | – | – | |
| TMHMM | 417 | 439 | 23 | – | – | |
| Phobius | 423 | 443 | 21 | – | – | |
| PRINTS | 424 | 447 | 24 | 3.00E-07 | ||
| Phobius | 444 | 463 | 20 | – | – | |
| Phobius | 464 | 484 | 21 | – | – | |
| TMHMM | 464 | 486 | 23 | – | – | |
| Phobius | 485 | 495 | 11 | – | – | |
| TMHMM | 496 | 513 | 18 | – | – | |
| Phobius | 496 | 513 | 18 | – | – | |
| Phobius | 514 | 800 | 287 | – | – | |
| ProSiteProfiles | 518 | 624 | 107 | 13.585 | ||
| Gene3D | 522 | 621 | 100 | 5.30E-13 | – | |
| Pfam | 522 | 621 | 100 | 2.80E-27 | ||
| SUPERFAMILY | 522 | 621 | 100 | 9.15E-15 | ||
| CDD | 525 | 718 | 194 | 9.91E-41 | – | |
| Gene3D | 627 | 718 | 92 | 4.30E-13 | – | |
| Pfam | 628 | 792 | 165 | 1.10E-42 | ||
| SUPERFAMILY | 630 | 795 | 166 | 5.66E-09 | – | |
| TMHMM | 630 | 647 | 18 | – | – | |
| PRINTS | 633 | 650 | 18 | 3.00E-07 | ||
| Gene3D | 754 | 795 | 42 | 4.30E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v1719720.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1719720.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.