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Lj4g3v1881580.1

Overview

Field Value
Gene ID Lj4g3v1881580
Transcript ID Lj4g3v1881580.1
Lotus japonicus genome version MG20 v3.0
Description CUE domain containing protein [Zea mays] gi|226499346|ref|NP_001149805.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 267 267 1.30E-138
PANTHER 1 267 267 1.30E-138
MobiDBLite 17 39 23
SUPERFAMILY 35 83 49 2.14E-08
ProSiteProfiles 39 82 44 13.759
Pfam 41 80 40 2.80E-05
CDD 43 77 35 8.40E-07
Coils 176 196 21
Coils 207 241 35

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj4g3v1881580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1881580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.