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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003892
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.995s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: activating signal cointegrator 1 complex subunit 2-like [Cicer arietinum] gi|502132779|ref|XP_004501524.1| chr1 20276812 20283656 +
n.a. ubiquitin system component Cue protein [Arabidopsis thaliana] gi|334188002|ref|NP_001190418.1| chr3 566102 568770 -
n.a. PREDICTED: E3 ubiquitin protein ligase RIN2-like [Glycine max] gi|356517740|ref|XP_003527544.1| chr3 9736393 9745483 +
n.a. CUE domain containing protein [Zea mays] gi|226499346|ref|NP_001149805.1| chr4 26588254 26591101 +
n.a. Activating signal cointegrator 1 complex subunit 2; TAIR: AT1G27752.2 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9H1I8|ASCC2_HUMAN Activating signal cointegrator 1 complex subunit 2; TrEMBL-Plants: tr|A0A151TTU0|A0A151TTU0_CAJCA Activating signal cointegrator 1 complex subunit 2; Found in the gene: LotjaGi1g1v0361000 LjG1.1_chr1 83586334 83593714 +
n.a. Activating signal cointegrator 1 complex subunit 2; TAIR: AT1G27752.1 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9H1I8|ASCC2_HUMAN Activating signal cointegrator 1 complex subunit 2; TrEMBL-Plants: tr|I1JTQ4|I1JTQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361000 LjG1.1_chr1 83586359 83593465 +
n.a. Ubiquitin system component CUE protein; TAIR: AT5G32440.1 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9BXX2|AN30B_HUMAN Ankyrin repeat domain-containing protein 30B; TrEMBL-Plants: tr|C6TF13|C6TF13_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0008100 LjG1.1_chr3 915180 918381 -
n.a. E3 ubiquitin-protein ligase; TAIR: AT4G25230.1 RPM1 interacting protein 2; Swiss-Prot: sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2; TrEMBL-Plants: tr|I1KFP9|I1KFP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0100000 LjG1.1_chr3 12435832 12445941 -
n.a. Ubiquitin system component CUE protein; TAIR: AT5G32440.1 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q8R3V6|CUED1_MOUSE CUE domain-containing protein 1; TrEMBL-Plants: tr|I3S6N5|I3S6N5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355100 LjG1.1_chr3 73677290 73681685 -
n.a. Ubiquitin system component CUE protein; TAIR: AT5G32440.1 Ubiquitin system component Cue protein; Swiss-Prot: sp|Q9NWM3|CUED1_HUMAN CUE domain-containing protein 1; TrEMBL-Plants: tr|I3S6N5|I3S6N5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0355100 LjG1.1_chr3 73677290 73681685 -
n.a. Ubiquitin system component CUE protein; TAIR: AT5G32440.3 Ubiquitin system component Cue protein; Swiss-Prot: sp|A9B457|EFTS_HERA2 Elongation factor Ts; TrEMBL-Plants: tr|A0A0S3R6J5|A0A0S3R6J5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0274600 LjG1.1_chr4 64423431 64427227 +
n.a. CTC-interacting domain protein, putative; TAIR: AT5G11440.1 CTC-interacting domain 5; Swiss-Prot: sp|Q9LYE5|CID5_ARATH Polyadenylate-binding protein-interacting protein 5; TrEMBL-Plants: tr|I3SNT6|I3SNT6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0063100 LjG1.1_chr5 10580671 10583504 -