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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2253590 |
| Transcript ID | Lj4g3v2253590.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CAS1 domain-containing protein 1-like isoform X1 [Cicer arietinum] gi|502150772|ref|XP_004508116.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 6 | 539 | 534 | 0 | – | |
| PANTHER | 6 | 539 | 534 | 0 | – | |
| TMHMM | 10 | 27 | 18 | – | – | |
| Phobius | 12 | 31 | 20 | – | – | |
| Phobius | 32 | 102 | 71 | – | – | |
| Phobius | 103 | 120 | 18 | – | – | |
| Pfam | 104 | 515 | 412 | 2.00E-97 | ||
| Phobius | 121 | 139 | 19 | – | – | |
| TMHMM | 138 | 155 | 18 | – | – | |
| Phobius | 140 | 159 | 20 | – | – | |
| Phobius | 160 | 179 | 20 | – | – | |
| Phobius | 180 | 196 | 17 | – | – | |
| Phobius | 197 | 201 | 5 | – | – | |
| TMHMM | 202 | 224 | 23 | – | – | |
| Phobius | 202 | 224 | 23 | – | – | |
| Phobius | 225 | 235 | 11 | – | – | |
| Phobius | 236 | 257 | 22 | – | – | |
| TMHMM | 236 | 258 | 23 | – | – | |
| Phobius | 258 | 262 | 5 | – | – | |
| TMHMM | 262 | 279 | 18 | – | – | |
| Phobius | 263 | 281 | 19 | – | – | |
| Phobius | 282 | 292 | 11 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 293 | 316 | 24 | – | – | |
| Phobius | 317 | 335 | 19 | – | – | |
| Phobius | 336 | 356 | 21 | – | – | |
| TMHMM | 345 | 364 | 20 | – | – | |
| Phobius | 357 | 375 | 19 | – | – | |
| Phobius | 376 | 396 | 21 | – | – | |
| TMHMM | 376 | 398 | 23 | – | – | |
| Phobius | 397 | 407 | 11 | – | – | |
| Phobius | 408 | 426 | 19 | – | – | |
| TMHMM | 408 | 427 | 20 | – | – | |
| Phobius | 427 | 437 | 11 | – | – | |
| TMHMM | 434 | 456 | 23 | – | – | |
| Phobius | 438 | 457 | 20 | – | – | |
| Phobius | 458 | 476 | 19 | – | – | |
| TMHMM | 476 | 495 | 20 | – | – | |
| Phobius | 477 | 496 | 20 | – | – | |
| Phobius | 497 | 516 | 20 | – | – | |
| TMHMM | 515 | 537 | 23 | – | – | |
| Phobius | 517 | 539 | 23 | – | – | |
| Phobius | 540 | 544 | 5 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v2253590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2253590.1, powered by CORGI.
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