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Lj4g3v2593530.1

Overview

Field Value
Gene ID Lj4g3v2593530
Transcript ID Lj4g3v2593530.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cicer arietinum] gi|502149407|ref|XP_004507515.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 112 112 – –
PANTHER
PTHR31973:SF25
197 252 56 1.80E-24 –
PANTHER
PTHR31973
197 252 56 1.80E-24 –
Pfam
PF10536
200 483 284 6.00E-50
IPR019557
PANTHER
PTHR31973:SF25
314 402 89 1.80E-24 –
PANTHER
PTHR31973
314 402 89 1.80E-24 –
PANTHER
PTHR31973
454 497 44 1.80E-24 –
PANTHER
PTHR31973:SF25
454 497 44 1.80E-24 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj4g3v2593530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2593530.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.