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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2603950 |
| Transcript ID | Lj4g3v2603950.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyamine transporter At3g13620-like [Cicer arietinum] gi|502140771|ref|XP_004504331.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 471 | 471 | 0 | ||
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 1 | 471 | 471 | 0 | – | |
| PIRSF | 16 | 472 | 457 | 9.00E-64 | ||
| Phobius | 35 | 53 | 19 | – | – | |
| TMHMM | 35 | 53 | 19 | – | – | |
| Pfam | 48 | 423 | 376 | 8.00E-35 | ||
| Phobius | 54 | 58 | 5 | – | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| Phobius | 59 | 78 | 20 | – | – | |
| Phobius | 79 | 84 | 6 | – | – | |
| Phobius | 85 | 104 | 20 | – | – | |
| Phobius | 105 | 115 | 11 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 116 | 137 | 22 | – | – | |
| Phobius | 138 | 148 | 11 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 149 | 167 | 19 | – | – | |
| Phobius | 168 | 172 | 5 | – | – | |
| TMHMM | 172 | 194 | 23 | – | – | |
| Phobius | 173 | 196 | 24 | – | – | |
| Phobius | 197 | 247 | 51 | – | – | |
| Phobius | 248 | 266 | 19 | – | – | |
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 267 | 300 | 34 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 301 | 323 | 23 | – | – | |
| Phobius | 324 | 343 | 20 | – | – | |
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 344 | 366 | 23 | – | – | |
| TMHMM | 367 | 386 | 20 | – | – | |
| Phobius | 367 | 371 | 5 | – | – | |
| Phobius | 372 | 389 | 18 | – | – | |
| Phobius | 390 | 400 | 11 | – | – | |
| Phobius | 401 | 425 | 25 | – | – | |
| TMHMM | 403 | 425 | 23 | – | – | |
| Phobius | 426 | 430 | 5 | – | – | |
| TMHMM | 429 | 451 | 23 | – | – | |
| Phobius | 431 | 448 | 18 | – | – | |
| Phobius | 449 | 473 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2603950.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2603950.1, powered by CORGI.
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