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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2618530 |
| Transcript ID | Lj4g3v2618530.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | multifunctional transport intrinsic membrane protein 2 [Lotus japonicus] gi|9082287|gb|AAF82791.1|AF275316_1 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | – | – | |
| PANTHER | 19 | 268 | 250 | 3.90E-167 | ||
| PANTHER | 19 | 268 | 250 | 3.90E-167 | – | |
| Gene3D | 35 | 256 | 222 | 2.40E-69 | ||
| SUPERFAMILY | 36 | 261 | 226 | 4.32E-68 | ||
| Pfam | 36 | 247 | 212 | 7.80E-62 | ||
| PRINTS | 41 | 60 | 20 | 3.10E-46 | ||
| CDD | 41 | 250 | 210 | 7.95E-53 | ||
| Phobius | 43 | 63 | 21 | – | – | |
| TMHMM | 44 | 63 | 20 | – | – | |
| TIGRFAM | 45 | 247 | 203 | 7.70E-58 | ||
| Phobius | 64 | 69 | 6 | – | – | |
| Phobius | 70 | 91 | 22 | – | – | |
| TMHMM | 70 | 92 | 23 | – | – | |
| PRINTS | 80 | 104 | 25 | 3.10E-46 | ||
| Phobius | 92 | 156 | 65 | – | – | |
| PRINTS | 117 | 136 | 20 | 3.10E-46 | ||
| Phobius | 157 | 175 | 19 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| PRINTS | 162 | 180 | 19 | 3.10E-46 | ||
| Phobius | 176 | 186 | 11 | – | – | |
| TMHMM | 186 | 208 | 23 | – | – | |
| Phobius | 187 | 209 | 23 | – | – | |
| PRINTS | 193 | 215 | 23 | 3.10E-46 | ||
| Phobius | 210 | 228 | 19 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 229 | 250 | 22 | – | – | |
| PRINTS | 230 | 250 | 21 | 3.10E-46 | ||
| Phobius | 251 | 270 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v2618530.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2618530.1, powered by CORGI.
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