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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2678620 |
| Transcript ID | Lj4g3v2678620.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calpain-A-like [Fragaria vesca subsp]. vesca] gi|470149522|ref|XP_004310283.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 271 | 271 | 1.20E-96 | – | |
| PANTHER | 1 | 271 | 271 | 1.20E-96 | – | |
| Gene3D | 11 | 73 | 63 | 1.20E-25 | – | |
| Pfam | 12 | 123 | 112 | 4.40E-29 | ||
| SUPERFAMILY | 12 | 126 | 115 | 3.27E-35 | – | |
| ProSiteProfiles | 45 | 128 | 84 | 24.074 | ||
| PRINTS | 104 | 125 | 22 | 1.30E-08 | ||
| Gene3D | 105 | 123 | 19 | 1.20E-25 | – | |
| SMART | 119 | 269 | 151 | 5.60E-41 | ||
| SUPERFAMILY | 123 | 269 | 147 | 1.57E-30 | ||
| Gene3D | 124 | 263 | 140 | 2.10E-28 | – | |
| Pfam | 127 | 264 | 138 | 1.90E-19 | ||
| PRINTS | 235 | 263 | 29 | 1.30E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium-dependent cysteine-type endopeptidase activity | Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj4g3v2678620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2678620.1, powered by CORGI.
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