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Lj4g3v2689670.2

Overview

Field Value
Gene ID Lj4g3v2689670
Transcript ID Lj4g3v2689670.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description ankyrin-kinase [Medicago truncatula] gi|18700701|gb|AAL78674.1|AF458699_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF000654
8 227 220 3.70E-78 –
PANTHER
PTHR23257:SF378
25 226 202 2.80E-132 –
PANTHER
PTHR23257
25 226 202 2.80E-132 –
SMART
SM00248
75 103 29 1000
IPR002110
SUPERFAMILY
SSF48403
79 175 97 1.03E-22
IPR020683
CDD
cd00204
80 178 99 4.59E-24 –
Gene3D
G3DSA:1.25.40.20
81 177 97 2.20E-23
IPR020683
Pfam
PF12796
81 167 87 6.70E-10
IPR020683
ProSiteProfiles
PS50297
86 172 87 22.278
IPR020683
ProSiteProfiles
PS50088
107 139 33 14.639
IPR002110
SMART
SM00248
107 136 30 2.00E-07
IPR002110

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj4g3v2689670.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2689670.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.