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Lj4g3v2704630.4

Overview

Field Value
Gene ID Lj4g3v2704630
Transcript ID Lj4g3v2704630.4
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 7-like [Glycine max] gi|356525381|ref|XP_003531303.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 541 541 0
PANTHER 1 541 541 0
SUPERFAMILY 12 130 119 5.75E-31
Gene3D 12 116 105 1.60E-26
SMART 16 37 22 0.013
Pfam 18 40 23 4.80E-06
SMART 39 60 22 7.40E-05
Pfam 41 62 22 2.10E-06
SMART 62 83 22 7.7
Pfam 64 84 21 0.0028
SMART 85 106 22 0.16
Pfam 87 109 23 0.0084
SUPERFAMILY 104 200 97 8.89E-26
SMART 108 129 22 0.0065
Pfam 110 132 23 1.10E-04
Gene3D 117 203 87 3.30E-25
SMART 131 152 22 6.70E-06
Pfam 133 154 22 1.70E-06
SMART 154 175 22 3.00E-04
Pfam 156 177 22 8.50E-07
SMART 177 198 22 0.033
Pfam 179 199 21 4.30E-04
MobiDBLite 238 263 26
Gene3D 348 520 173 1.30E-64
ProSiteProfiles 349 541 193 42.56
SUPERFAMILY 349 541 193 3.01E-65
SMART 379 541 163 1.30E-26
Pfam 443 541 99 4.10E-43

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Phosphatidylinositol phosphate kinase activity Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate.
Biological process Phosphatidylinositol metabolic process The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.

Expression data

Expression pattern

Expression pattern of Lj4g3v2704630.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2704630.4, powered by CORGI.

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