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Lj4g3v2963520.1

Overview

Field Value
Gene ID Lj4g3v2963520
Transcript ID Lj4g3v2963520.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: cytochrome P450 86A2-like [Cicer arietinum] gi|502139249|ref|XP_004503701.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24296:SF35
1 516 516 0 –
PANTHER
PTHR24296
1 516 516 0 –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 5 5 – –
Phobius
TRANSMEMBRANE
6 23 18 – –
TMHMM
TMhelix
7 24 18 – –
Phobius
CYTOPLASMIC_DOMAIN
24 526 503 – –
Gene3D
G3DSA:1.10.630.10
25 508 484 2.00E-96
IPR001128
SUPERFAMILY
SSF48264
27 508 482 5.37E-92
IPR001128
Pfam
PF00067
28 494 467 6.30E-65
IPR001128
PRINTS
PR00463
293 310 18 1.70E-10
IPR002401
PRINTS
PR00385
304 321 18 4.50E-11
IPR001128
PRINTS
PR00463
313 339 27 1.70E-10
IPR002401
PRINTS
PR00463
366 384 19 1.70E-10
IPR002401
PRINTS
PR00385
367 378 12 4.50E-11
IPR001128
PRINTS
PR00463
446 456 11 1.70E-10
IPR002401
PRINTS
PR00385
447 456 10 4.50E-11
IPR001128
ProSitePatterns
PS00086
449 458 10 –
IPR017972
PRINTS
PR00385
456 467 12 4.50E-11
IPR001128
PRINTS
PR00463
456 479 24 1.70E-10
IPR002401

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005506
Molecular function Iron ion binding Interacting selectively and non-covalently with iron (Fe) ions.
Subterm of
GO:0016705
Molecular function Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj4g3v2963520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2963520.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.