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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3014540 |
| Transcript ID | Lj4g3v3014540.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 44-like [Glycine max] gi|356527704|ref|XP_003532448.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 706 | 701 | 0 | – | |
| PANTHER | 6 | 706 | 701 | 0 | – | |
| Gene3D | 238 | 287 | 50 | 2.30E-57 | ||
| SMART | 246 | 285 | 40 | 5.80E-08 | ||
| SUPERFAMILY | 247 | 288 | 42 | 6.50E-52 | ||
| Pfam | 251 | 285 | 35 | 5.00E-06 | ||
| ProSiteProfiles | 253 | 439 | 187 | 13.817 | ||
| ProSiteProfiles | 253 | 294 | 42 | 14.753 | ||
| PRINTS | 272 | 286 | 15 | 7.60E-06 | ||
| Gene3D | 350 | 585 | 236 | 2.30E-57 | ||
| SMART | 350 | 388 | 39 | 1.70E-08 | ||
| SUPERFAMILY | 351 | 566 | 216 | 6.50E-52 | ||
| Pfam | 352 | 387 | 36 | 1.40E-06 | ||
| ProSiteProfiles | 357 | 389 | 33 | 10.475 | ||
| PRINTS | 375 | 389 | 15 | 7.60E-06 | ||
| SMART | 391 | 430 | 40 | 7.60E-07 | ||
| Pfam | 393 | 429 | 37 | 0.0047 | ||
| ProSiteProfiles | 397 | 431 | 35 | 11.21 | ||
| PRINTS | 417 | 431 | 15 | 7.60E-06 | ||
| SMART | 433 | 471 | 39 | 15 | ||
| SMART | 486 | 522 | 37 | 7.4 | ||
| SMART | 523 | 563 | 41 | 3 | ||
| SMART | 658 | 698 | 41 | 9.3 | ||
| SUPERFAMILY | 659 | 697 | 39 | 6.50E-52 | ||
| Gene3D | 682 | 698 | 17 | 2.30E-57 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v3014540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3014540.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.