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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3113060 |
| Transcript ID | Lj4g3v3113060.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable calcium-binding protein CML25-like [Glycine max] gi|356511295|ref|XP_003524362.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 20 | 182 | 163 | 5.20E-104 | – | |
| PANTHER | 20 | 182 | 163 | 5.20E-104 | – | |
| ProSiteProfiles | 32 | 67 | 36 | 15.294 | ||
| SUPERFAMILY | 35 | 171 | 137 | 3.99E-43 | ||
| Gene3D | 35 | 96 | 62 | 9.90E-23 | ||
| Pfam | 35 | 95 | 61 | 7.90E-14 | ||
| SMART | 36 | 64 | 29 | 2.70E-06 | ||
| CDD | 36 | 96 | 61 | 2.96E-19 | ||
| ProSitePatterns | 45 | 57 | 13 | – | ||
| ProSiteProfiles | 68 | 103 | 36 | 11.835 | ||
| SMART | 72 | 100 | 29 | 0.024 | ||
| ProSitePatterns | 81 | 93 | 13 | – | ||
| Gene3D | 104 | 172 | 69 | 1.90E-25 | ||
| ProSiteProfiles | 105 | 140 | 36 | 15.35 | ||
| SMART | 109 | 137 | 29 | 5.30E-05 | ||
| CDD | 110 | 171 | 62 | 4.51E-19 | ||
| ProSitePatterns | 118 | 130 | 13 | – | ||
| Pfam | 122 | 170 | 49 | 1.90E-11 | ||
| ProSiteProfiles | 141 | 176 | 36 | 11.78 | ||
| SMART | 145 | 173 | 29 | 1.30E-04 | ||
| ProSitePatterns | 154 | 166 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj4g3v3113060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3113060.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.