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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0108170 |
| Transcript ID | Lj5g3v0108170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: metal-nicotianamine transporter YSL3-like isoform 1 [Glycine max] gi|356509198|ref|XP_003523338.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 386 | 386 | 9.20E-74 | ||
| Pfam | 1 | 390 | 390 | 2.20E-86 | ||
| PANTHER | 1 | 407 | 407 | 0 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 407 | 407 | 0 | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 34 | 57 | 24 | – | – | |
| Phobius | 58 | 81 | 24 | – | – | |
| TMHMM | 59 | 81 | 23 | – | – | |
| Phobius | 82 | 122 | 41 | – | – | |
| Phobius | 123 | 144 | 22 | – | – | |
| TMHMM | 123 | 145 | 23 | – | – | |
| Phobius | 145 | 149 | 5 | – | – | |
| TMHMM | 150 | 172 | 23 | – | – | |
| Phobius | 150 | 170 | 21 | – | – | |
| Phobius | 171 | 237 | 67 | – | – | |
| TMHMM | 185 | 207 | 23 | – | – | |
| Phobius | 238 | 260 | 23 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Phobius | 261 | 293 | 33 | – | – | |
| Phobius | 294 | 315 | 22 | – | – | |
| Phobius | 316 | 326 | 11 | – | – | |
| Phobius | 327 | 357 | 31 | – | – | |
| TMHMM | 334 | 356 | 23 | – | – | |
| Phobius | 358 | 368 | 11 | – | – | |
| Phobius | 369 | 393 | 25 | – | – | |
| TMHMM | 371 | 393 | 23 | – | – | |
| Phobius | 394 | 407 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v0108170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0108170.1, powered by CORGI.
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