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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0495880 |
| Transcript ID | Lj5g3v0495880.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chorismate mutase, chloroplastic-like isoform X1 [Cicer arietinum] gi|502125132|ref|XP_004498811.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| PANTHER | 9 | 277 | 269 | 3.20E-174 | – | |
| PANTHER | 9 | 277 | 269 | 3.20E-174 | ||
| Phobius | 19 | 23 | 5 | – | – | |
| PIRSF | 20 | 277 | 258 | 2.30E-102 | ||
| Phobius | 24 | 277 | 254 | – | – | |
| ProSiteProfiles | 24 | 277 | 254 | 84.622 | ||
| SUPERFAMILY | 25 | 277 | 253 | 2.38E-90 | ||
| Gene3D | 25 | 277 | 253 | 4.20E-99 | ||
| TIGRFAM | 32 | 277 | 246 | 1.50E-84 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chorismate mutase activity | Catalysis of the reaction: chorismate = prephenate. | ||
| Biological process | Aromatic amino acid family biosynthetic process | The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan). |
Expression pattern of Lj5g3v0495880.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0495880.3, powered by CORGI.
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