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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0529110 |
| Transcript ID | Lj5g3v0529110.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium uptake protein 1, mitochondrial-like isoform X1 [Cicer arietinum] gi|502124999|ref|XP_004498755.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 114 | 478 | 365 | 2.30E-227 | – | |
| PANTHER | 114 | 478 | 365 | 2.30E-227 | – | |
| SUPERFAMILY | 196 | 264 | 69 | 2.07E-17 | ||
| CDD | 197 | 254 | 58 | 6.79E-08 | ||
| SMART | 197 | 222 | 26 | 56 | ||
| Gene3D | 197 | 243 | 47 | 2.70E-12 | ||
| ProSiteProfiles | 224 | 259 | 36 | 13.704 | ||
| SMART | 228 | 256 | 29 | 4.30E-06 | ||
| Pfam | 232 | 255 | 24 | 1.50E-07 | ||
| ProSitePatterns | 237 | 249 | 13 | – | ||
| Gene3D | 244 | 299 | 56 | 2.10E-06 | ||
| SUPERFAMILY | 285 | 339 | 55 | 6.88E-15 | ||
| ProSiteProfiles | 292 | 313 | 22 | 6.033 | ||
| Gene3D | 300 | 453 | 154 | 1.50E-12 | ||
| SUPERFAMILY | 379 | 449 | 71 | 6.88E-15 | ||
| Pfam | 398 | 449 | 52 | 6.90E-13 | ||
| SUPERFAMILY | 411 | 449 | 39 | 2.07E-17 | ||
| ProSiteProfiles | 418 | 453 | 36 | 10.692 | ||
| SMART | 422 | 450 | 29 | 3.6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj5g3v0529110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0529110.1, powered by CORGI.
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