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Lj5g3v0529470.1

Overview

Field Value
Gene ID Lj5g3v0529470
Transcript ID Lj5g3v0529470.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-like [Glycine max] gi|356552517|ref|XP_003544613.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 34 34
Phobius 1 47 47
PANTHER 1 354 354 1.20E-229
PANTHER 1 354 354 1.20E-229
TMHMM 48 70 23
Phobius 48 65 18
Pfam 62 346 285 3.20E-11
Phobius 66 76 11
Phobius 77 96 20
TMHMM 77 96 20
Phobius 97 127 31
Phobius 128 145 18
TMHMM 129 151 23
Phobius 146 156 11
Phobius 157 174 18
TMHMM 172 194 23
Phobius 175 180 6
Phobius 181 198 18
Phobius 199 203 5
Phobius 204 224 21
TMHMM 204 226 23
Phobius 225 235 11
TMHMM 233 255 23
Phobius 236 256 21
Phobius 257 275 19
TMHMM 270 292 23
Phobius 276 298 23
Phobius 299 309 11
Phobius 310 328 19
TMHMM 313 335 23
Phobius 329 333 5
Phobius 334 352 19
Phobius 353 354 2

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj5g3v0529470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0529470.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.