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Lj5g3v0539600.1

Overview

Field Value
Gene ID Lj5g3v0539600
Transcript ID Lj5g3v0539600.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: EIN3-binding F-box protein 1-like [Cicer arietinum] gi|502124962|ref|XP_004498740.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24006
1 94 94 6.70E-48 –
PANTHER
PTHR24006:SF501
1 94 94 6.70E-48 –
Gene3D
G3DSA:3.80.10.10
12 194 183 6.30E-33
IPR032675
SUPERFAMILY
SSF52047
13 189 177 3.92E-26 –
SMART
SM00367
20 45 26 0.58
IPR006553
SMART
SM00367
46 71 26 2.2
IPR006553
SMART
SM00367
73 98 26 130
IPR006553
SMART
SM00367
100 125 26 33
IPR006553
Pfam
PF13516
102 123 22 1
IPR001611
PANTHER
PTHR24006:SF501
113 159 47 6.70E-48 –
PANTHER
PTHR24006
113 159 47 6.70E-48 –
SMART
SM00367
126 150 25 7.9
IPR006553
Pfam
PF13516
129 148 20 0.015
IPR001611
SMART
SM00367
152 177 26 3.1
IPR006553

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj5g3v0539600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0539600.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.